Basic Information
Locus ID:
nbisL1-mrna-6353
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 5423311 | 5429659 | - | nbisL1-mrna-6353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 89,402.02 Da | 39.51 | 64.88 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 104 | 157 | 1.73371E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 104 | 165 | 2.0E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 517 | 724 | 1.3E-74 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 99 | 164 | 1.96E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 91 | 187 | 3.2E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 103 | 160 | 6.7E-19 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 104 | 168 | 16.705923 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 145 | 164 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 140 | 160 | 1.2E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 106 | 124 | 1.2E-9 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 124 | 139 | 1.2E-9 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 801 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 8 | 28 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_012090104.1 | uncharacterized protein LOC105648353 [Jatropha curcas] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A067JEB4 | J domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_25993 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology