Basic Information
Locus ID:
nbisL1-mrna-6349
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
amine oxidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11639291 | 11644933 | + | nbisL1-mrna-6349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 136,187.80 Da | 38.47 | 82.12 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 674 | 756 | 1.2E-23 | IPR015800 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 119 | 217 | 1.6E-19 | IPR015802 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 769 | 863 | 6.7E-24 | IPR015802 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 1127 | 1203 | 8.6E-25 | IPR015798 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 241 | 657 | 9.0E-137 | IPR015798 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 955 | 1027 | 1.1E-19 | IPR015798 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 1028 | 1126 | 7.4E-18 | IPR015798 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 890 | 954 | 8.3E-10 | IPR015798 |
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 26 | 111 | 6.6E-15 | IPR015800 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 229 | 662 | 3.27E-152 | IPR036460 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 890 | 1203 | 9.68E-94 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 672 | 766 | 2.88E-19 | IPR016182 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 25 | 116 | 5.23E-24 | IPR016182 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 767 | 873 | 4.91E-32 | IPR016182 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 117 | 225 | 9.42E-34 | IPR016182 |
| Gene3D | G3DSA:3.10.450.40 | - | 24 | 119 | 2.7E-27 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 955 | 1027 | 8.2E-21 | IPR036460 |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 880 | 954 | 6.3E-13 | IPR036460 |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 1028 | 1126 | 2.7E-20 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 672 | 769 | 4.7E-25 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 250 | 666 | 4.6E-156 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 771 | 864 | 2.3E-26 | - |
| Gene3D | G3DSA:3.10.450.40 | - | 120 | 214 | 1.3E-27 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 1127 | 1205 | 5.9E-28 | IPR036460 |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 1166 | 1179 | - | IPR000269 |
| ProSitePatterns | PS01164 | Copper amine oxidase topaquinone signature. | 998 | 1011 | - | IPR000269 |
| ProSitePatterns | PS01164 | Copper amine oxidase topaquinone signature. | 396 | 409 | - | IPR000269 |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 618 | 631 | - | IPR000269 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31690.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_019071128.1 | uncharacterized protein LOC101254423 [Solanum lycopersicum] | 0 |
| F4IAX0 | Amine oxidase [copper-containing] alpha 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=CuAOalpha2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3GT24 | Amine oxidase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology