Basic Information
Locus ID:
nbisL1-mrna-6348
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
amine oxidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11645853 | 11651006 | - | nbisL1-mrna-6348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 76,695.54 Da | 33.15 | 85.33 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 246 | 662 | 4.7E-131 | IPR015798 |
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 30 | 116 | 6.3E-19 | IPR015800 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 136 | 221 | 9.0E-18 | IPR015802 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 28 | 119 | 1.39E-24 | IPR016182 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 233 | 665 | 1.83E-144 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 121 | 229 | 8.9E-31 | IPR016182 |
| Gene3D | G3DSA:3.10.450.40 | - | 29 | 123 | 5.0E-30 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 254 | 669 | 5.5E-152 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 124 | 217 | 1.3E-24 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31690.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_002315777.4 | primary amine oxidase [Populus trichocarpa] | 0 |
| F4IAX0 | Amine oxidase [copper-containing] alpha 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=CuAOalpha2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7H8R2 | Amine oxidase OS=Populus trichocarpa OX=3694 GN=POPTR_010G089050 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology