Basic Information
Locus ID:
nbisL1-mrna-6334
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11774982 | 11777931 | - | nbisL1-mrna-6334 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 33,140.47 Da | 53.11 | 77.84 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 58 | 9.94E-11 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 71 | 3.2E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 57 | 8.55603 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09000.2 | - | 0 |
| RefSeq | XP_021670836.1 | mitogen-activated protein kinase kinase kinase NPK1-like isoform X2 [Hevea brasiliensis] | 0 |
| Q40541 | Mitogen-activated protein kinase kinase kinase NPK1 OS=Nicotiana tabacum OX=4097 GN=NPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6K5T0 | Protein kinase domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_019568 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg12538, jg27918, jg27919, jg5721 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2638 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah020245 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg5075, Sbi_jg6852 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg13018 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003857 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012989, gene:ENSEOMG00000031082 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0013970, CQ.Regalona.r1.3BG0014120 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30083370, pistato.v30084290, pistato.v30237190 |
| Apiaceae | Apium graveolens | 3 | Ag1G00295, Ag1G00471, Ag4G01867 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G009490, COCNU_11G008720, COCNU_11G008730 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103710024, gene-LOC120111327 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.3205.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri4G18642, Ftri8G20477, FtriNA24065 |
| Brassicaceae | Arabidopsis thaliana | 4 | AT1G09000.1, AT1G54960.1, AT2G43930.1, AT3G06030.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10006999m.g.v1.0, Thhalv10020261m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp1g07610.v2.2, Sp3g04970.v2.2, SpUn0004_0010.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g057630.2N, BniB04g030790.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq06G1213, Ceq09G1311 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl06G1266, Cgl09G1402 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno02g06530, gene.Cymno03g08750 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0042s00009.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g10800 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5419 |
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG01.1383, evm.TU.LG03.2428, evm.TU.LG11.1087 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00021255 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G24020, Lb4G24038 |
| Poaceae | Echinochloa crus-galli | 6 | AH03.1802, AH08.1561, BH03.1941, BH08.1395, CH03.2144 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0534200, gene-QOZ80_6BG0487250 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0478260.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_004882, gene-QYE76_031941, gene-QYE76_045404 |
| Poaceae | Oryza coarctata | 4 | Oco15G008440, Oco16G008000, Oco17G004020, Oco18G003990 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g32600.1, LOC_Os09g21510.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G172600, gene-BS78_07G137100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0300765, Pt_Chr0403231 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr10G010820, Chr11G011590, Chr14G013290, Chr20G006110 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G335700, Tel6E01G350900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4BG005790, gene_TRIDC5AG011490 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS3A02G016500.1, TraesCS5A02G200800.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb099000_P001, Zm00001eb179120_P003 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-19965, nbis-gene-45105, nbis-gene-45106 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g22997, Zma_g22998, Zma_g24070, Zma_g32463 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG06.1706, evm.TU.LG06.1710, evm.TU.LG11.1064 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g21280 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_1_RagTag.152, evm.TU.Scaffold_3_RagTag.472 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-15975, nbisL1-mrna-8101 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-4146, nbisL1-mrna-5113 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-5226, nbisL1-mrna-596 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.432, evm.TU.utg000012l.107 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007446, Maker00011504 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-15341, nbisL1-mrna-6334, nbisL1-mrna-7849 ... |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-140, nbisL1-mrna-3444 |
| Salicaceae | Populus euphratica | 4 | populus_peu07349, populus_peu13415, populus_peu15750 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132644967, gene-LOC132645897 |
| Solanaceae | Solanum chilense | 2 | SOLCI004394800, SOLCI004421000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107011843, gene-LOC107012462 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9354 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1420 |
| Zosteraceae | Zostera marina | 2 | Zosma01g11790.v3.1, Zosma04g16450.v3.1 |