Basic Information
Locus ID:
nbisL1-mrna-6331
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12476469 | 12478955 | + | nbisL1-mrna-6331 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 26,374.96 Da | 37.83 | 73.64 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 35 | 225 | 4.8E-77 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 112 | 215 | 1.08E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 113 | 230 | 2.0E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 118 | 218 | 23.309216 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.2 | - | 0 |
| RefSeq | XP_039042927.1 | auxin-responsive protein IAA14-like isoform X1 [Hibiscus syriacus] | 0 |
| P13089 | Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2Y1E8 | Auxin-responsive protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112614pilonHSYRG00019 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology