Basic Information
Locus ID:
nbisL1-mrna-6322
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12402338 | 12408474 | + | nbisL1-mrna-6322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.82 | 71,756.32 Da | 81.93 | 37.45 | -1.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 7 | 173 | 5.57114E-107 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 20 | 173 | 2.3E-49 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 175 | 5.11E-76 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 1.0E-84 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | 44.398987 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 1.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 1.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 1.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 1.2E-34 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 1.2E-34 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 520 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 627 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 198 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_039001064.1 | peptidyl-prolyl cis-trans isomerase CYP63-like isoform X1 [Hibiscus syriacus] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3AIY3 | Peptidyl-prolyl cis-trans isomerase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110462pilonHSYRG00557 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology