Basic Information
Locus ID:
nbisL1-mrna-6318
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12345852 | 12351072 | + | nbisL1-mrna-6318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 63,697.91 Da | 46.33 | 81.20 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 214 | 3.6E-54 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 223 | 1.28E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 79 | 310 | 2.7E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 78 | 2.0E-21 | - |
| SMART | SM00220 | serkin_6 | 4 | 273 | 1.9E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 366 | 35.933586 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 384 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63280.1 | NIMA-related kinase 4. Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_039000798.1 | serine/threonine-protein kinase Nek4-like [Hibiscus syriacus] | 0 |
| A2ZMH2 | Serine/threonine-protein kinase Nek2 OS=Oryza sativa subsp. indica OX=39946 GN=NEK2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5D2WNE3 | Protein kinase domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A12G003600v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology