Basic Information
Locus ID:
nbisL1-mrna-6290
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 12137066 | 12138271 | - | nbisL1-mrna-6290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 43,473.67 Da | 38.26 | 106.98 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 129 | 187 | 1.8E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 71 | 7.1E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 221 | 234 | 1.4 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 371 | 2.04E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 374 | 1.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 289 | 8.6E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 218 | 6.1E-40 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_039003871.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Hibiscus syriacus] | 0 |
| TrEMBL | A0A6A3AAD1 | Transducin family protein / WD-40 repeat family protein isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110548pilonHSYRG01015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology