Basic Information
Locus ID:
nbisL1-mrna-6255
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 12412395 | 12415378 | + | nbisL1-mrna-6255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 37,257.27 Da | 43.95 | 67.52 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 193 | 330 | 1.4E-29 | IPR006571 |
| SMART | SM00584 | 109ultra | 167 | 331 | 4.6E-28 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 168 | 331 | 26.337425 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 158 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_034914640.1 | oxidation resistance protein 1 isoform X2 [Populus alba] | 0 |
| A8KBE0 | Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U5QQW2 | TLDc domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000059860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology