Basic Information
Locus ID:
nbisL1-mrna-6235
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 12567465 | 12573674 | - | nbisL1-mrna-6235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 63,389.75 Da | 41.21 | 71.14 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 116 | 481 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 120 | 417 | 4.0E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 436 | 480 | 1.1E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 468 | 1.29E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 202 | 267 | 4.0E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 316 | 435 | 1.9E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 201 | 4.0E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 446 | 1.9E-44 | - |
| SMART | SM00133 | pkinase_C_6 | 418 | 482 | 2.1E-7 | IPR000961 |
| SMART | SM00220 | serkin_6 | 118 | 417 | 3.4E-104 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 118 | 417 | 47.792015 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 418 | 490 | 14.449873 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 124 | 147 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 46 | - | - |
| Coils | Coil | Coil | 60 | 80 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_007035137.2 | PREDICTED: serine/threonine-protein kinase tricorner [Theobroma cacao] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MJK1 | Serine/threonine-protein kinase tricorner-like OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology