Basic Information
Locus ID:
nbisL1-mrna-6193
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 4533662 | 4537485 | - | nbisL1-mrna-6193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 92,429.72 Da | 28.07 | 99.82 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 122 | 182 | 2.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 528 | 797 | 1.6E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 195 | 254 | 2.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 528 | 800 | 5.13E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 34 | 325 | 1.49E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 431 | 4.93E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 604 | 812 | 5.6E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 314 | 1.4E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 315 | 442 | 3.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 603 | 2.5E-20 | - |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 289 | 57.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 525 | 804 | 1.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 291 | 313 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 49 | 73 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 217 | 241 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 361 | 385 | 32.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 525 | 804 | 38.237431 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 651 | 663 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 531 | 554 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021677134.1 | - | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6MUH6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology