Basic Information
Locus ID:
nbisL1-mrna-618
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4951301 | 4955242 | - | nbisL1-mrna-618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 76,956.89 Da | 55.08 | 86.97 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 76 | 3.1E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 665 | 2.0E-25 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 190 | 5.53E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 665 | 4.33E-45 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 223 | 3.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 486 | 3.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 673 | 1.3E-35 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 668 | 23.326059 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 329 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 257 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_038992995.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 [Hibiscus syriacus] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J6D178 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_012347 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology