Basic Information
Locus ID:
nbisL1-mrna-6175
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 4443784 | 4454864 | + | nbisL1-mrna-6175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 153,699.31 Da | 43.18 | 83.10 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 788 | 1075 | 1.67219E-170 | - |
| CDD | cd15798 | PMEI-like_3 | 1227 | 1382 | 2.89143E-49 | - |
| Pfam | PF00069 | Protein kinase domain | 782 | 1070 | 2.3E-64 | IPR000719 |
| Pfam | PF04043 | Plant invertase/pectin methylesterase inhibitor | 1224 | 1376 | 3.1E-34 | IPR006501 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 779 | 1099 | 1.35E-91 | IPR011009 |
| SUPERFAMILY | SSF101148 | Plant invertase/pectin methylesterase inhibitor | 1223 | 1380 | 3.01E-35 | IPR035513 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 780 | 1097 | 1.3E-107 | - |
| Gene3D | G3DSA:1.20.140.40 | Invertase/pectin methylesterase inhibitor family protein | 1219 | 1380 | 1.7E-38 | IPR035513 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 866 | 1088 | 1.3E-107 | - |
| SMART | SM00856 | PMEI_2 | 1220 | 1376 | 8.7E-47 | IPR006501 |
| SMART | SM00220 | serkin_6 | 782 | 1070 | 9.9E-106 | IPR000719 |
| TIGRFAM | TIGR01614 | PME_inhib: pectinesterase inhibitor domain | 1217 | 1380 | 1.1E-35 | IPR006501 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 782 | 1070 | 51.636463 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 901 | 913 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 139 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| Coils | Coil | Coil | 1296 | 1316 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_021634725.1 | probable serine/threonine protein kinase IRE isoform X1 [Manihot esculenta] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9UID7 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_14G034300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology