Basic Information
Locus ID:
nbisL1-mrna-6167
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 4401194 | 4405193 | - | nbisL1-mrna-6167 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 74,328.14 Da | 32.65 | 95.95 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 63 | 9.2E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 198 | 4.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 669 | 1.9E-31 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 232 | 3.97E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 669 | 5.27E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 482 | 7.4E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 484 | 675 | 8.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 291 | 1.1E-58 | IPR032675 |
| SMART | SM00220 | serkin_6 | 404 | 676 | 3.0E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 676 | 26.08219 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021617090.1 | probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Manihot esculenta] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9VS35 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G137200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology