Basic Information
Locus ID:
nbisL1-mrna-6151
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000065F_pilon | 2132294 | 2136466 | + | nbisL1-mrna-6151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 43,345.12 Da | 29.14 | 80.26 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 90 | 361 | 3.9637E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 361 | 1.7E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 361 | 2.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 167 | 3.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 187 | 372 | 3.4E-60 | - |
| SMART | SM00220 | serkin_6 | 84 | 364 | 5.4E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 364 | 40.583675 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 228 | 240 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 184 | 197 | 8.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 222 | 240 | 8.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 332 | 354 | 8.2E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 288 | 310 | 8.2E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021691958.1 | serine/threonine-protein kinase HT1-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7ZAF8 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_030206 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology