Basic Information
Locus ID:
nbisL1-mrna-6072
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 4285433 | 4290877 | + | nbisL1-mrna-6072 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 77,931.40 Da | 42.09 | 91.67 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 418 | 689 | 1.61656E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 414 | 684 | 4.2E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 85 | 5.2E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 253 | 8.5E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 686 | 1.94E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 278 | 7.8E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 713 | 2.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 489 | 1.0E-30 | - |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 157 | 180 | 5.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 111 | 139 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 227 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 689 | 37.318718 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 302 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_021637699.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Hevea brasiliensis] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KHE3 | Uncharacterized protein MANES_16G003200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology