Basic Information
Locus ID:
nbisL1-mrna-6028
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 6451054 | 6454521 | - | nbisL1-mrna-6028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.91 | 126,354.05 Da | 45.22 | 81.30 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 496 | 741 | 3.88586E-136 | - |
| Pfam | PF04548 | AIG1 family | 524 | 657 | 3.5E-28 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 882 | 1146 | 1.2E-126 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 517 | 658 | 2.25E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 492 | 741 | 2.1E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 400 | 1147 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 521 | 750 | 32.707577 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 781 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 401 | - | - |
| Coils | Coil | Coil | 40 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021650247.1 | translocase of chloroplast 120, chloroplastic-like [Hevea brasiliensis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LUB9 | Protein translocase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology