Basic Information
Locus ID:
nbisL1-mrna-6012
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
PSR
Description:
(2R)-phospho-3-sulfolactate synthase (ComA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 3692421 | 3694436 | - | nbisL1-mrna-6012 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 32,283.48 Da | 42.19 | 83.55 | -0.26 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21320.1 | Aldolase-type TIM barrel family protein. Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment. | 0 |
| RefSeq | XP_010999551.1 | PREDICTED: uncharacterized protein LOC105107356 [Populus euphratica] | 0 |
| Q8GWL1 | Protein HEAT-STRESS-ASSOCIATED 32 OS=Arabidopsis thaliana OX=3702 GN=HSA32 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2KZM0 | Uncharacterized protein LOC105107356 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20377 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22123 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah017754 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg40263, Sbi_jg50262, Sbi_jg50263 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1849 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011423 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41644, Sgl46443 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009098, gene:ENSEOMG00000030161 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002980, CQ.Regalona.r1.8BG0003060 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30075320 |
| Apiaceae | Apium graveolens | 1 | Ag8G01009 |
| Arecaceae | Cocos nucifera | 1 | scaffold006130G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103724328 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.2592.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G24514 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G21320.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025914m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g19390.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g070740.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1707 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g18970 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.628 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G25051 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2727, BH06.2525, CH06.2824 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0548410, gene-QOZ80_6BG0502110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0732330.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_035922 |
| Poaceae | Oryza coarctata | 2 | Oco11G015390, Oco12G015710 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g46900.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G233900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401199 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr05G009880, Chr15G023510 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G760200 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG056670, gene_TRIDC7AG062490 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G451100.1, TraesCS7B02G351000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb225360_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-40591 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g33267 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.778, evm.TU.LG20.1117 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.124 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29633 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-10203 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20824 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000015l.83 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00015606 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-6012 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16970 |
| Salicaceae | Populus euphratica | 2 | populus_peu10193, populus_peu18345 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132621745 |
| Solanaceae | Solanum chilense | 1 | SOLCI007250600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009558 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_17598 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1151 |