Basic Information
Locus ID:
nbisL1-mrna-5994
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 9559844 | 9563158 | - | nbisL1-mrna-5994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 57,035.67 Da | 37.70 | 76.77 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 36 | 457 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 47 | 186 | 2.2E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 308 | 457 | 2.8E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 43 | 464 | 2.0E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 458 | 2.3E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 128 | 8.6E-39 | - |
| SMART | SM00220 | serkin_6 | 47 | 457 | 8.4E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 47 | 457 | 29.234072 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 76 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 231 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_039068330.1 | serine/threonine-protein kinase SRPK-like [Hibiscus syriacus] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8J5Z1Z0 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_003039 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology