Basic Information
Locus ID:
nbisL1-mrna-5936
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 5846750 | 5867027 | - | nbisL1-mrna-5936 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 342,759.78 Da | 52.85 | 90.76 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 239 | 570 | 5.7E-110 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 233 | 604 | 5.31E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 228 | 582 | 2.1E-136 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 231 | 578 | 1.9E-165 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 233 | 570 | 124.299042 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 466 | 477 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 467 | 485 | 3.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 305 | 326 | 3.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 434 | 451 | 3.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 520 | 541 | 3.2E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 82 | - | - |
| Coils | Coil | Coil | 2545 | 2565 | - | - |
| Coils | Coil | Coil | 1232 | 1252 | - | - |
| Coils | Coil | Coil | 2835 | 2855 | - | - |
| Coils | Coil | Coil | 2342 | 2362 | - | - |
| Coils | Coil | Coil | 2740 | 2816 | - | - |
| Coils | Coil | Coil | 2885 | 2905 | - | - |
| Coils | Coil | Coil | 2089 | 2109 | - | - |
| Coils | Coil | Coil | 672 | 699 | - | - |
| Coils | Coil | Coil | 2475 | 2537 | - | - |
| Coils | Coil | Coil | 1639 | 1666 | - | - |
| Coils | Coil | Coil | 1611 | 1631 | - | - |
| Coils | Coil | Coil | 1034 | 1054 | - | - |
| Coils | Coil | Coil | 1330 | 1350 | - | - |
| Coils | Coil | Coil | 1537 | 1557 | - | - |
| Coils | Coil | Coil | 1943 | 1963 | - | - |
| Coils | Coil | Coil | 1193 | 1213 | - | - |
| Coils | Coil | Coil | 1358 | 1378 | - | - |
| Coils | Coil | Coil | 2138 | 2158 | - | - |
| Coils | Coil | Coil | 2573 | 2604 | - | - |
| Coils | Coil | Coil | 1080 | 1100 | - | - |
| Coils | Coil | Coil | 2307 | 2327 | - | - |
| Coils | Coil | Coil | 1484 | 1518 | - | - |
| Coils | Coil | Coil | 2384 | 2404 | - | - |
| Coils | Coil | Coil | 2651 | 2671 | - | - |
| Coils | Coil | Coil | 2016 | 2078 | - | - |
| Coils | Coil | Coil | 584 | 604 | - | - |
| Coils | Coil | Coil | 2412 | 2453 | - | - |
| Coils | Coil | Coil | 1115 | 1149 | - | - |
| Coils | Coil | Coil | 954 | 1009 | - | - |
| Coils | Coil | Coil | 926 | 946 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021639818.1 | kinesin-like protein KIN-12D [Hevea brasiliensis] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | B9S764 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0773970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology