Basic Information
Locus ID:
nbisL1-mrna-5931
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 5791820 | 5795693 | - | nbisL1-mrna-5931 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 68,025.95 Da | 53.67 | 80.91 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 151 | 411 | 1.8254E-125 | - |
| Pfam | PF00069 | Protein kinase domain | 151 | 412 | 2.1E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 146 | 444 | 6.07E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 443 | 593 | 1.64E-18 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 240 | 421 | 5.5E-63 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 431 | 594 | 2.2E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 152 | 239 | 1.7E-20 | - |
| SMART | SM00220 | serkin_6 | 150 | 412 | 1.9E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 150 | 412 | 50.830822 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 454 | 489 | 8.766953 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 156 | 182 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 274 | 286 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 132 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_021654498.1 | - | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | J7F6B4 | Calcium-dependent protein kinase 6 OS=Hevea brasiliensis OX=3981 GN=CDPK6 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology