Basic Information
Locus ID:
nbisL1-mrna-5918
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 2570371 | 2573856 | + | nbisL1-mrna-5918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 67,756.21 Da | 41.90 | 97.77 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 289 | 558 | 7.7E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 64 | 1.5E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 271 | 561 | 1.62E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 189 | 5.65E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 364 | 571 | 6.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 258 | 363 | 1.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 206 | 5.0E-53 | IPR032675 |
| SMART | SM00220 | serkin_6 | 288 | 560 | 1.0E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 288 | 564 | 35.679176 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 410 | 422 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 294 | 316 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021635584.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2IJB9 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology