Basic Information
Locus ID:
nbisL1-mrna-5791
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 2428414 | 2432779 | + | nbisL1-mrna-5791 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 62,525.83 Da | 36.46 | 75.49 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 39 | 486 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 322 | 486 | 1.0E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 50 | 189 | 3.0E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 46 | 499 | 5.22E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 487 | 1.1E-77 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 132 | 1.4E-40 | - |
| SMART | SM00220 | serkin_6 | 50 | 486 | 1.5E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 50 | 486 | 29.96904 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 56 | 79 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 309 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_021685975.1 | SRSF protein kinase 2-like [Hevea brasiliensis] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A2P2QMI2 | Srpk OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology