Basic Information
Locus ID:
nbisL1-mrna-5783
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 2595911 | 2598585 | + | nbisL1-mrna-5783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 59,271.81 Da | 40.02 | 79.40 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 33 | 476 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 44 | 183 | 5.2E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 312 | 476 | 2.1E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 38 | 492 | 8.01E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 125 | 7.3E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 477 | 1.3E-79 | - |
| SMART | SM00220 | serkin_6 | 44 | 476 | 2.6E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 476 | 28.555639 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 533 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_006384686.1 | uncharacterized protein LOC18098008 [Populus trichocarpa] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A2P2P031 | Kinase family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology