Basic Information
Locus ID:
nbisL1-mrna-5751
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
SERK5
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 4593115 | 4594136 | - | nbisL1-mrna-5751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 16,339.61 Da | 45.95 | 89.86 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 15 | 123 | 1.1E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 125 | 2.52E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 142 | 2.6E-37 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 136 | 10.563058 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33430.1 | BRI1-associated receptor kinase. Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. | 0 |
| RefSeq | XP_027106326.1 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 isoform X2 [Coffea arabica] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2I0I1I2 | Protein kinase domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_041768 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30110870 |
| Arecaceae | Cocos nucifera | 1 | COCNU_05G006660 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020346 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb6G31964 |
| Poaceae | Echinochloa crus-galli | 1 | BH05.1369 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-17468, nbisL1-mrna-8036 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5751 |
| Salicaceae | Populus euphratica | 1 | populus_peu16677 |