Basic Information
Locus ID:
nbisL1-mrna-5728
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 3454705 | 3459063 | + | nbisL1-mrna-5728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.29 | 19,325.59 Da | 42.17 | 79.49 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 30 | 102 | 1.2E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 101 | 8.17E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 22 | 142 | 4.9E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 178 | 12.174335 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 178 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011046412.1 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J8WRT5 | Protein kinase domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_018706 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg36043 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5728 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11986 |