Basic Information
Locus ID:
nbisL1-mrna-5725
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 4108509 | 4110041 | + | nbisL1-mrna-5725 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 55,769.93 Da | 50.81 | 64.94 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 271 | 316 | 0.00720189 | - |
| CDD | cd06257 | DnaJ | 70 | 124 | 8.33492E-7 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 70 | 132 | 1.7E-11 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 65 | 135 | 8.11E-13 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 66 | 137 | 6.0E-12 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 69 | 127 | 1.9E-5 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 70 | 135 | 11.913481 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 261 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021668274.1 | uncharacterized protein LOC110656047 isoform X1 [Hevea brasiliensis] | 0 |
| O13633 | Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1 | 0 | |
| TrEMBL | U5FLI7 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology