Basic Information
Locus ID:
nbisL1-mrna-5714
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 3630885 | 3641488 | - | nbisL1-mrna-5714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 162,449.20 Da | 45.82 | 87.31 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 103 | 433 | 3.0E-110 | IPR001752 |
| SUPERFAMILY | SSF57997 | Tropomyosin | 1043 | 1241 | 3.79E-5 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 97 | 468 | 5.67E-120 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 91 | 446 | 1.7E-137 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 95 | 442 | 1.8E-159 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 97 | 434 | 119.513832 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 330 | 341 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 298 | 315 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 384 | 405 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 331 | 349 | 3.5E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 169 | 190 | 3.5E-41 | IPR001752 |
| Coils | Coil | Coil | 805 | 846 | - | - |
| Coils | Coil | Coil | 883 | 910 | - | - |
| Coils | Coil | Coil | 1105 | 1139 | - | - |
| Coils | Coil | Coil | 714 | 741 | - | - |
| Coils | Coil | Coil | 615 | 635 | - | - |
| Coils | Coil | Coil | 1199 | 1223 | - | - |
| Coils | Coil | Coil | 585 | 605 | - | - |
| Coils | Coil | Coil | 1269 | 1289 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_012066330.1 | kinesin-like protein KIN-12E [Jatropha curcas] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | B9SS38 | Kinesin, putative OS=Ricinus communis OX=3988 GN=RCOM_0395650 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology