Basic Information
Locus ID:
nbisL1-mrna-5712
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the 14-3-3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 7060677 | 7063203 | - | nbisL1-mrna-5712 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 29,300.66 Da | 39.89 | 86.77 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 13 | 238 | 2.2E-101 | IPR023410 |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 6 | 240 | 1.83E-100 | IPR036815 |
| Gene3D | G3DSA:1.20.190.20 | - | 1 | 253 | 1.4E-129 | IPR036815 |
| SMART | SM00101 | 1433_4 | 7 | 250 | 2.7E-192 | IPR023410 |
| PIRSF | PIRSF000868 | 14-3-3 | 1 | 250 | 5.4E-114 | IPR000308 |
| ProSitePatterns | PS00796 | 14-3-3 proteins signature 1. | 48 | 58 | - | IPR023409 |
| ProSitePatterns | PS00797 | 14-3-3 proteins signature 2. | 220 | 239 | - | IPR023409 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 211 | 240 | 2.5E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 157 | 183 | 2.5E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 122 | 144 | 2.5E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 184 | 210 | 2.5E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 42 | 71 | 2.5E-86 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 91 | 115 | 2.5E-86 | IPR000308 |
| Coils | Coil | Coil | 13 | 33 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09000.1 | general regulatory factor 1. Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available. | 0 |
| RefSeq | XP_039063028.1 | 14-3-3 protein 6-like [Hibiscus syriacus] | 0 |
| P93784 | 14-3-3-like protein 16R OS=Solanum tuberosum OX=4113 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A3BYP7 | 14-3-3-like protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00015125pilonHSYRG00028 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology