Basic Information
Locus ID:
nbisL1-mrna-5709
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Chaperone DnaJ-domain superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 7049080 | 7051152 | + | nbisL1-mrna-5709 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 76,427.67 Da | 55.24 | 59.10 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 61 | 115 | 1.78104E-6 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 61 | 123 | 6.0E-9 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 52 | 127 | 1.14E-10 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 58 | 177 | 1.3E-9 | IPR036869 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 61 | 126 | 9.813934 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 103 | 122 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 357 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_039047733.1 | uncharacterized protein LOC120188348 isoform X1 [Hibiscus syriacus] | 0 |
| TrEMBL | A0A6A2XFX5 | Chaperone DnaJ-domain superfamily protein, putative isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116944pilonHSYRG00251 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology