Basic Information
Locus ID:
nbisL1-mrna-569
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 6291838 | 6296764 | - | nbisL1-mrna-569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 120,088.70 Da | 35.96 | 96.78 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 274 | 333 | 5.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 717 | 987 | 1.1E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 370 | 390 | 0.94 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.045 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 82 | 141 | 1.2E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 513 | 570 | 2.4E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 77 | 3.7E-4 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 85 | 430 | 6.36E-67 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 990 | 6.61E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 394 | 623 | 5.78E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 794 | 1006 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 684 | 793 | 1.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 321 | 633 | 4.5E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 319 | 3.8E-74 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 714 | 994 | 3.4E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 465 | 488 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 440 | 464 | 33.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 999 | 38.237431 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 841 | 853 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 743 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_017973822.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Theobroma cacao] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Q3D9U1 | Pkinase domain-containing protein/LRR_1 domain-containing protein/LRR_4 domain-containing protein/LRR_7 domain-containing protein/LRR_6 domain-containing protein/LRR_8 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_32449 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology