Basic Information
Locus ID:
nbisL1-mrna-5643
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6505501 | 6516260 | + | nbisL1-mrna-5643 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 62,358.64 Da | 56.32 | 81.65 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 303 | 487 | 6.60864E-88 | - |
| CDD | cd04928 | ACT_TyrKc | 182 | 249 | 1.58948E-31 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 440 | 487 | 2.1E-5 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 430 | 1.7E-35 | IPR001245 |
| SUPERFAMILY | SSF55021 | ACT-like | 182 | 246 | 1.58E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 487 | 1.37E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 430 | 6.0E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 526 | 3.9E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 370 | 5.7E-28 | - |
| SMART | SM00220 | serkin_6 | 297 | 490 | 2.3E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 553 | 26.774755 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 184 | 262 | 13.56834 | IPR002912 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 414 | 426 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 144 | - | - |
| Coils | Coil | Coil | 234 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38470.2 | - | 0 |
| RefSeq | XP_039002809.1 | serine/threonine-protein kinase STY46-like isoform X1 [Hibiscus syriacus] | 0 |
| F4JTP5 | Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5D2VGJ1 | Serine/threonine-protein kinase STY46-like OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G194400v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology