Basic Information
Locus ID:
nbisL1-mrna-5589
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 1020269 | 1025121 | - | nbisL1-mrna-5589 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 77,687.17 Da | 42.97 | 81.36 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 11 | 266 | 8.89109E-135 | - |
| Pfam | PF00069 | Protein kinase domain | 12 | 265 | 1.6E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 295 | 2.16E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 278 | 5.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 91 | 5.9E-23 | - |
| SMART | SM00220 | serkin_6 | 12 | 266 | 4.4E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 266 | 46.887436 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 18 | 41 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 420 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021665113.1 | serine/threonine-protein kinase Nek6-like [Hevea brasiliensis] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251KAV4 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_08G047800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology