Basic Information
Locus ID:
nbisL1-mrna-5565
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
galactinol--sucrose galactosyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002174F_pilon | 847119 | 853476 | - | nbisL1-mrna-5565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 85,606.42 Da | 27.79 | 82.69 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 10 | 761 | 0.0 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 199 | 526 | 1.26E-58 | IPR017853 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 203 | 525 | 6.7E-12 | IPR013785 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 707 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 707 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 0 |
| RefSeq | XP_006381015.2 | probable galactinol--sucrose galactosyltransferase 2 [Populus trichocarpa] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 0 | |
| TrEMBL | B9II69 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology