Basic Information
Locus ID:
nbisL1-mrna-5547
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5825624 | 5828804 | - | nbisL1-mrna-5547 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 55,052.03 Da | 53.73 | 50.77 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 394 | 451 | 1.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 214 | 270 | 6.5E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 385 | 453 | 2.09E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 210 | 272 | 1.96E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 200 | 273 | 4.0E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 378 | 454 | 8.3E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 213 | 271 | 1.4E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 393 | 452 | 1.6E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 208 | 272 | 23.766314 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 388 | 453 | 37.91795 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 504 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_039055035.1 | probable WRKY transcription factor 3 isoform X2 [Hibiscus syriacus] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2XKU5 | Putative WRKY transcription factor 3 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117048pilonHSYRG00313 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology