Basic Information
Locus ID:
nbisL1-mrna-5534
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
phospholipase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 2833293 | 2835925 | + | nbisL1-mrna-5534 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 27,100.17 Da | 33.78 | 71.27 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04185 | Phosphoesterase family | 14 | 237 | 8.2E-53 | IPR007312 |
| Gene3D | G3DSA:3.40.720.10 | Alkaline Phosphatase, subunit A | 8 | 186 | 1.1E-33 | IPR017850 |
Gene Ontology
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko00564 (Glycerophospholipid metabolism)
map00564 (Glycerophospholipid metabolism)
ko00565 (Ether lipid metabolism)
map00565 (Ether lipid metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Reaction:
R01312 (Phosphatidylcholine + H2O <=> 1,2-Diacyl-sn-glycerol + Choline phosphate)
R02027 (Phosphatidylglycerol + H2O <=> 1,2-Diacyl-sn-glycerol + sn-Glycerol 3-phosphate)
R02052 (Phosphatidylethanolamine + H2O <=> 1,2-Diacyl-sn-glycerol + Ethanolamine phosphate)
R03332 (1-Phosphatidyl-D-myo-inositol + H2O <=> Inositol 1-phosphate + 1,2-Diacyl-sn-glycerol)
R07381 (O-1-Alk-1-enyl-2-acyl-sn-glycero-3-phosphoethanolamine + H2O <=> 1-Alkenyl-2-acylglycerol + Ethanolamine phosphate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03530.1 | non-specific phospholipase C4. PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation. | 0 |
| RefSeq | XP_002524007.2 | non-specific phospholipase C4 [Ricinus communis] | 0 |
| Q9SRQ7 | Non-specific phospholipase C4 OS=Arabidopsis thaliana OX=3702 GN=NPC4 PE=1 SV=1 | 0 | |
| TrEMBL | B9SDD8 | Phospholipase C 3, putative OS=Ricinus communis OX=3988 GN=RCOM_1516850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology