Basic Information
Locus ID:
nbisL1-mrna-553
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 3224566 | 3227204 | - | nbisL1-mrna-553 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 59,487.51 Da | 49.39 | 85.55 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 210 | 471 | 7.5E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 189 | 472 | 4.65E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 500 | 5.9E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 181 | 281 | 4.9E-24 | - |
| SMART | SM00220 | serkin_6 | 207 | 471 | 1.9E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 207 | 479 | 34.152706 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 213 | 235 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 326 | 338 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021688905.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Hevea brasiliensis] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5FX28 | Mitogen-activated protein kinase kinase kinase OS=Trema orientale OX=63057 GN=TorRG33x02_021450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology