Basic Information
Locus ID:
nbisL1-mrna-5526
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 2771843 | 2772571 | + | nbisL1-mrna-5526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.08 | 25,436.39 Da | 41.54 | 81.41 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 3 | 68 | 4.0E-13 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 114 | 235 | 4.7E-20 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 4 | 239 | 5.42E-36 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 100 | 242 | 8.6E-32 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1 | 68 | 1.1E-10 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 235 | 17.371618 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 119 | 130 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_002523993.2 | aspartic proteinase CDR1 [Ricinus communis] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | B9SDC4 | Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis OX=3988 GN=RCOM_1516300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology