halophFGD

Basic Information

Locus ID: nbisL1-mrna-5500

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Short Name: CIPK23

Description: Non-specific serine threonine protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	5452682	5459894	+	nbisL1-mrna-5500

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.93	51,529.61 Da	35.59	87.38	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd12195	CIPK_C	319	434	1.96251E-51	-
CDD	cd14663	STKc_SnRK3	15	270	6.68278E-174	-
Pfam	PF00069	Protein kinase domain	16	271	5.7E-74	IPR000719
Pfam	PF03822	NAF domain	315	375	5.6E-23	IPR004041
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	13	283	4.32E-93	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	8	313	4.6E-104	-
Gene3D	G3DSA:3.30.310.80	Kinase associated domain 1, KA1	314	438	1.3E-56	-
SMART	SM00220	serkin_6	16	271	1.0E-107	IPR000719
ProSiteProfiles	PS50816	NAF domain profile.	313	337	12.699261	IPR018451
ProSiteProfiles	PS50011	Protein kinase domain profile.	16	271	52.018078	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	22	45	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	135	147	-	IPR008271

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation) GO:0007165 (signal transduction)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K07198 (5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31])

Pathway:

ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04211 (Longevity regulating pathway) map04211 (Longevity regulating pathway) ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) ko04710 (Circadian rhythm)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G30270.2	-
RefSeq	XP_040932237.1	CBL-interacting serine/threonine-protein kinase 23-like [Gossypium hirsutum]
Swiss-Prot	Q93VD3	CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana OX=3702 GN=CIPK23 PE=1 SV=1
TrEMBL	A0A5D2B7M8	non-specific serine/threonine protein kinase OS=Gossypium darwinii OX=34276 GN=ES288_A09G099100v1 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10778, jg16364, jg20782, jg22293, jg31703, jg33056, jg8501 ... jg35621, jg37682
Aizoaceae	Mesembryanthemum crystallinum	5	gene_10627, gene_1181, gene_1603, gene_20932, gene_22548
Amaranthaceae	Atriplex hortensis	5	Ah014338, Ah016367, Ah022784, Ah023570, Ah037502
Amaranthaceae	Beta vulgaris	5	BVRB_1g002320, BVRB_1g005170, BVRB_8g187980, BVRB_8g194320 ... BVRB_9g207630
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg28913, Sbi_jg3018, Sbi_jg3844, Sbi_jg40576 ... Sbi_jg40692, Sbi_jg49083, Sbi_jg50604, Sbi_jg50695
Amaranthaceae	Salicornia europaea	4	Seu_jg2163, Seu_jg2255, Seu_jg6155, Seu_jg6872
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00000647, GOSA_00000925, GOSA_00007972, GOSA_00015982 ... GOSA_00020813
Amaranthaceae	Suaeda glauca	12	Sgl10833, Sgl11695, Sgl11852, Sgl11853, Sgl16187, Sgl17010 ... Sgl42029, Sgl45142, Sgl46797, Sgl49986, Sgl78988, Sgl81440
Amaranthaceae	Chenopodium album	15	gene:ENSEOMG00000010679, gene:ENSEOMG00000012026 ... gene:ENSEOMG00000014394, gene:ENSEOMG00000015379, gene:ENSEOMG00000017513, gene:ENSEOMG00000032909, gene:ENSEOMG00000033091, gene:ENSEOMG00000033116, gene:ENSEOMG00000034544, gene:ENSEOMG00000039649, gene:ENSEOMG00000044099, gene:ENSEOMG00000046267, gene:ENSEOMG00000047139, gene:ENSEOMG00000049319, gene:ENSEOMG00000052015
Amaranthaceae	Chenopodium quinoa	9	CQ.Regalona.r1.1AG0004030, CQ.Regalona.r1.1AG0009630 ... CQ.Regalona.r1.1BG0016180, CQ.Regalona.r1.2BG0026830, CQ.Regalona.r1.8AG0009850, CQ.Regalona.r1.8AG0022040, CQ.Regalona.r1.8BG0020420, CQ.Regalona.r1.9AG0005730, CQ.Regalona.r1.9BG0016190
Anacardiaceae	Pistacia vera	4	pistato.v30006420, pistato.v30042320, pistato.v30054860 ... pistato.v30255060
Apiaceae	Apium graveolens	6	Ag2G00478, Ag2G00797, Ag2G02842, Ag6G01129, Ag6G01530 ... Ag7G00941
Arecaceae	Cocos nucifera	8	COCNU_04G005950, COCNU_06G020130, COCNU_07G007660 ... COCNU_10G005820, COCNU_12G005220, COCNU_14G006260, scaffold004540G000010, scaffold017325G000010
Arecaceae	Phoenix dactylifera	7	gene-LOC103698261, gene-LOC103703688, gene-LOC103705015 ... gene-LOC103708740, gene-LOC103718496, gene-LOC103722966, gene-LOC120103985
Asparagaceae	Asparagus officinalis	7	AsparagusV1_02.1998.V1.1, AsparagusV1_04.2307.V1.1 ... AsparagusV1_06.1137.V1.1, AsparagusV1_06.1861.V1.1, AsparagusV1_07.1699.V1.1, AsparagusV1_07.3439.V1.1, AsparagusV1_10.261.V1.1
Asteraceae	Flaveria trinervia	7	Ftri10G10875, Ftri11G12366, Ftri15G12416, Ftri17G28736 ... Ftri18G17559, Ftri3G19705, Ftri6G33210
Brassicaceae	Arabidopsis thaliana	6	AT1G01140.3, AT1G30270.1, AT2G26980.4, AT4G24400.1 ... AT5G21326.1, AT5G35410.1
Brassicaceae	Eutrema salsugineum	6	Thhalv10001987m.g.v1.0, Thhalv10007518m.g.v1.0 ... Thhalv10007632m.g.v1.0, Thhalv10013527m.g.v1.0, Thhalv10025204m.g.v1.0, Thhalv10027753m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp1g01140.v2.2, Sp1g26110.v2.2, Sp4g08370.v2.2 ... Sp6g23320.v2.2, Sp7g01940.v2.2, Sp7g22380.v2.2
Brassicaceae	Brassica nigra	11	BniB01g016870.2N, BniB01g027130.2N, BniB02g000620.2N ... BniB02g041680.2N, BniB03g016170.2N, BniB03g034310.2N, BniB03g037290.2N, BniB04g045660.2N, BniB05g012800.2N, BniB05g042300.2N, BniB06g016170.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq03G1039, Ceq04G0179, Ceq04G1273, Ceq05G0666, Ceq06G0615
Casuarinaceae	Casuarina glauca	5	Cgl03G1121, Cgl04G0260, Cgl04G1434, Cgl05G0679, Cgl06G0636
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno01g15710, gene.Cymno03g02840, gene.Cymno09g03040 ... gene.Cymno09g03100, gene.Cymno16g01580, gene.Cymno17g04490
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate05g11630, gene.Thate06g12940, gene.Thate07g10360 ... gene.Thate09g12980
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-5500, nbisL1-mrna-7528
Nitrariaceae	Nitraria sibirica	5	evm.TU.LG04.632, evm.TU.LG06.257, evm.TU.LG07.950 ... evm.TU.LG09.46, evm.TU.LG12.55
Plantaginaceae	Plantago ovata	5	Pov_00013104, Pov_00017160, Pov_00026689, Pov_00028251 ... Pov_00032885
Plumbaginaceae	Limonium bicolor	7	Lb2G10820, Lb2G13543, Lb2G14703, Lb4G22950, Lb5G27390 ... Lb6G30994, Lb7G34718
Poaceae	Echinochloa crus-galli	23	AH01.3825, AH01.5153, AH02.1941, AH03.232, AH03.4115 ... AH04.156, AH05.115, AH06.2243, BH01.4167, BH01.5059, BH01.5292, BH03.298, BH03.4456, BH04.187, BH05.124, BH07.4004, CH01.4441, CH02.2156, CH03.367, CH04.199, CH05.191, CH06.2263, CH07.57
Poaceae	Eleusine coracana subsp. coracana	17	gene-QOZ80_1AG0019960, gene-QOZ80_1BG0069650 ... gene-QOZ80_3AG0231990, gene-QOZ80_3AG0246300, gene-QOZ80_3BG0281880, gene-QOZ80_3BG0295950, gene-QOZ80_5AG0380270, gene-QOZ80_5BG0427360, gene-QOZ80_6AG0544480, gene-QOZ80_6BG0498030, gene-QOZ80_7AG0555660, gene-QOZ80_7AG0582400, gene-QOZ80_7BG0586630, gene-QOZ80_7BG0613500, gene-QOZ80_9AG0673570, gene-QOZ80_9BG0697270, gene-QOZ80_UnG0726200
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.2HG0110800.1, HORVU.MOREX.r3.2HG0153230.2 ... HORVU.MOREX.r3.3HG0264740.1, HORVU.MOREX.r3.4HG0356420.1, HORVU.MOREX.r3.4HG0380570.1, HORVU.MOREX.r3.4HG0410930.1, HORVU.MOREX.r3.7HG0720050.2
Poaceae	Lolium multiflorum	8	gene-QYE76_007243, gene-QYE76_034988, gene-QYE76_038646 ... gene-QYE76_042490, gene-QYE76_053163, gene-QYE76_065195, gene-QYE76_068313, gene-QYE76_071223
Poaceae	Oryza coarctata	15	Oco02G012230, Oco05G001590, Oco05G012090, Oco06G001560 ... Oco06G014330, Oco11G012650, Oco12G012620, Oco13G001470, Oco13G016290, Oco14G001580, Oco14G017110, Oco21G000470, Oco22G001230, Oco23G001240, Oco24G000600
Poaceae	Oryza sativa	8	LOC_Os01g35184.2, LOC_Os03g03510.1, LOC_Os03g20380.1 ... LOC_Os06g40370.1, LOC_Os07g05620.1, LOC_Os07g48760.1, LOC_Os11g03970.2, LOC_Os12g03810.2
Poaceae	Paspalum vaginatum	8	gene-BS78_01G371600, gene-BS78_01G497500 ... gene-BS78_02G034400, gene-BS78_02G396000, gene-BS78_03G169300, gene-BS78_05G031600, gene-BS78_08G009100, gene-BS78_10G186000
Poaceae	Puccinellia tenuiflora	12	Pt_Chr0100548, Pt_Chr0100592, Pt_Chr0103698, Pt_Chr0103703 ... Pt_Chr0107736, Pt_Chr0107875, Pt_Chr0205227, Pt_Chr0303533, Pt_Chr0305392, Pt_Chr0400681, Pt_Chr0400686, Pt_Chr0602955
Poaceae	Sporobolus alterniflorus	18	Chr01G033340, Chr02G029900, Chr03G008270, Chr04G005680 ... Chr04G009970, Chr04G021610, Chr05G007610, Chr06G023210, Chr07G001800, Chr07G005900, Chr07G021780, Chr08G008790, Chr0G007990, Chr10G017670, Chr11G004940, Chr12G000950, Chr12G006230, Chr31G000610
Poaceae	Thinopyrum elongatum	5	Tel2E01G466000, Tel3E01G350100, Tel4E01G320900 ... Tel4E01G527700, Tel7E01G640700
Poaceae	Triticum dicoccoides	14	gene_TRIDC2AG011410, gene_TRIDC2AG032990 ... gene_TRIDC2BG014010, gene_TRIDC2BG039280, gene_TRIDC3AG029370, gene_TRIDC3BG032900, gene_TRIDC4AG017560, gene_TRIDC4AG029940, gene_TRIDC4BG020640, gene_TRIDC4BG034560, gene_TRIDC4BG053920, gene_TRIDC5AG070060, gene_TRIDC7AG052710, gene_TRIDC7BG045230
Poaceae	Triticum aestivum	21	TraesCS2A02G098300.1, TraesCS2A02G251800.1 ... TraesCS2B02G114000.1, TraesCS2B02G271700.1, TraesCS2D02G097700.1, TraesCS2D02G252600.1, TraesCS3A02G200900.1, TraesCS3B02G225800.1, TraesCS3D02G203000.4, TraesCS4A02G126800.3, TraesCS4A02G187300.1, TraesCS4B02G131000.1, TraesCS4B02G178100.1, TraesCS4B02G319900.1, TraesCS4D02G126200.1, TraesCS4D02G179700.2, TraesCS4D02G316500.1, TraesCS5A02G492000.1, TraesCS7A02G377600.1, TraesCS7B02G279300.1, TraesCS7D02G374400.2
Poaceae	Zea mays	12	Zm00001eb001940_P002, Zm00001eb015210_P004 ... Zm00001eb118540_P003, Zm00001eb162810_P004, Zm00001eb163480_P003, Zm00001eb196030_P001, Zm00001eb230790_P001, Zm00001eb276580_P001, Zm00001eb300010_P001, Zm00001eb331220_P001, Zm00001eb386410_P004, Zm00001eb403620_P001
Poaceae	Zoysia japonica	9	nbis-gene-10075, nbis-gene-1783, nbis-gene-21379 ... nbis-gene-27016, nbis-gene-3464, nbis-gene-35783, nbis-gene-41059, nbis-gene-4656, nbis-gene-51818
Poaceae	Zoysia macrostachya	10	Zma_g10506, Zma_g1328, Zma_g18382, Zma_g30792, Zma_g33039 ... Zma_g3738, Zma_g4528, Zma_g4733, Zma_g5823, Zma_g5977
Portulacaceae	Portulaca oleracea	10	evm.TU.LG01.843, evm.TU.LG02.2122, evm.TU.LG04.1634 ... evm.TU.LG04.2101, evm.TU.LG06.214, evm.TU.LG10.1261, evm.TU.LG19.1324, evm.TU.LG23.169, evm.TU.LG23.364, evm.TU.LG24.1319
Posidoniaceae	Posidonia oceanica	6	gene.Posoc02g06700, gene.Posoc03g29240, gene.Posoc06g08420 ... gene.Posoc08g07500, gene.Posoc09g12660, gene.Posoc10g05160
Rhizophoraceae	Bruguiera sexangula	7	evm.TU.Scaffold_10_RagTag.46, evm.TU.Scaffold_12_RagTag.450 ... evm.TU.Scaffold_13_RagTag.623, evm.TU.Scaffold_14_RagTag.914, evm.TU.Scaffold_16_RagTag.831, evm.TU.Scaffold_5_RagTag.673, evm.TU.Scaffold_7_RagTag.889
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-10681, nbisL1-mrna-12864, nbisL1-mrna-16680 ... nbisL1-mrna-16751, nbisL1-mrna-19355, nbisL1-mrna-24994, nbisL1-mrna-30446
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-11212, nbisL1-mrna-12981, nbisL1-mrna-17378 ... nbisL1-mrna-19339, nbisL1-mrna-21319, nbisL1-mrna-2780, nbisL1-mrna-3059, nbisL1-mrna-3885
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-11315, nbisL1-mrna-16005, nbisL1-mrna-16485 ... nbisL1-mrna-17229, nbisL1-mrna-19203, nbisL1-mrna-19711, nbisL1-mrna-6719
Rhizophoraceae	Kandelia candel	7	evm.TU.utg000002l.685, evm.TU.utg000006l.648 ... evm.TU.utg000015l.349, evm.TU.utg000022l.77, evm.TU.utg000025l.101, evm.TU.utg000027l.295, evm.TU.utg000033l.29
Rhizophoraceae	Kandelia obovata	7	Maker00010797, Maker00012322, Maker00013704, Maker00014994 ... Maker00015419, Maker00016133, Maker00018018
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-10205, nbisL1-mrna-13077, nbisL1-mrna-16744 ... nbisL1-mrna-4268, nbisL1-mrna-73, nbisL1-mrna-8664
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-10137, nbisL1-mrna-10311, nbisL1-mrna-11934 ... nbisL1-mrna-14450, nbisL1-mrna-15170, nbisL1-mrna-7311, nbisL1-mrna-9131
Salicaceae	Populus euphratica	11	populus_peu02362, populus_peu02407, populus_peu05692 ... populus_peu05764, populus_peu11055, populus_peu11077, populus_peu11129, populus_peu27504, populus_peu31490, populus_peu32149, populus_peu35575
Solanaceae	Lycium barbarum	7	gene-LOC132603173, gene-LOC132626394, gene-LOC132627671 ... gene-LOC132631125, gene-LOC132636977, gene-LOC132640615, gene-LOC132643662
Solanaceae	Solanum chilense	5	SOLCI000491500, SOLCI000590500, SOLCI002671700 ... SOLCI003893200, SOLCI005954000
Solanaceae	Solanum pennellii	5	gene-LOC107004731, gene-LOC107007370, gene-LOC107007745 ... gene-LOC107011621, gene-LOC107020719
Tamaricaceae	Reaumuria soongarica	6	STRG.10104_chr07_+, STRG.11090_chr05_-, STRG.12122_chr02_- ... STRG.29689_chr10_-, gene_1345, gene_14596
Tamaricaceae	Tamarix chinensis	6	TC01G2688, TC02G0035, TC03G0085, TC03G2053, TC06G1076 ... TC10G1321
Zosteraceae	Zostera marina	5	Zosma01g07720.v3.1, Zosma01g32850.v3.1, Zosma03g02040.v3.1 ... Zosma03g23610.v3.1, Zosma05g19500.v3.1