Basic Information
Locus ID:
nbisL1-mrna-5485
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 5646770 | 5651047 | - | nbisL1-mrna-5485 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 75,834.93 Da | 52.62 | 89.88 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 402 | 658 | 1.5E-29 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 80 | 1.7E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 188 | 1.29E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 656 | 4.25E-47 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 209 | 1.1E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 374 | 479 | 3.3E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 480 | 666 | 1.4E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 661 | 21.813721 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56050.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021646074.1 | probable inactive receptor-like protein kinase At3g56050 [Hevea brasiliensis] | 0 |
| Q9LYN6 | Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana OX=3702 GN=At3g56050 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JRX1 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology