Basic Information
Locus ID:
nbisL1-mrna-5477
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5259795 | 5276729 | + | nbisL1-mrna-5477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 247,064.02 Da | 42.69 | 88.08 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01373 | KISc_KLP2_like | 157 | 503 | 3.81811E-180 | - |
| Pfam | PF00225 | Kinesin motor domain | 164 | 494 | 1.9E-108 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 157 | 525 | 1.14E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 152 | 506 | 1.2E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 155 | 502 | 5.6E-159 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 157 | 494 | 116.767738 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 390 | 401 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 444 | 465 | 4.8E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 358 | 375 | 4.8E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 229 | 250 | 4.8E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 391 | 409 | 4.8E-41 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1839 | 1858 | - | - |
| Coils | Coil | Coil | 1872 | 1892 | - | - |
| Coils | Coil | Coil | 1648 | 1703 | - | - |
| Coils | Coil | Coil | 501 | 528 | - | - |
| Coils | Coil | Coil | 1386 | 1413 | - | - |
| Coils | Coil | Coil | 1768 | 1802 | - | - |
| Coils | Coil | Coil | 1048 | 1075 | - | - |
| Coils | Coil | Coil | 1115 | 1135 | - | - |
| Coils | Coil | Coil | 1982 | 2016 | - | - |
| Coils | Coil | Coil | 1613 | 1640 | - | - |
| Coils | Coil | Coil | 1814 | 1834 | - | - |
| Coils | Coil | Coil | 1944 | 1974 | - | - |
| Coils | Coil | Coil | 817 | 851 | - | - |
| Coils | Coil | Coil | 892 | 919 | - | - |
| Coils | Coil | Coil | 589 | 609 | - | - |
| Coils | Coil | Coil | 1712 | 1746 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.3 | - | 0 |
| RefSeq | XP_039025667.1 | kinesin-like protein KIN-12C [Hibiscus syriacus] | 0 |
| Q27IK7 | Kinesin-like protein KIN-12C OS=Arabidopsis thaliana OX=3702 GN=KIN12C PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3CUZ6 | Phragmoplast orienting kinesin-1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002841pilonHSYRG00183 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology