Basic Information
Locus ID:
nbisL1-mrna-5471
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5212129 | 5216030 | + | nbisL1-mrna-5471 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.35 | 79,194.93 Da | 42.20 | 69.22 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 124 | 225 | 6.29542E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 490 | 716 | 1.73371E-113 | - |
| Pfam | PF00989 | PAS fold | 116 | 225 | 2.8E-13 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 484 | 716 | 5.4E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 470 | 716 | 7.96E-71 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 119 | 222 | 1.43E-20 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 563 | 719 | 2.5E-47 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 125 | 230 | 1.0E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 477 | 561 | 1.5E-31 | - |
| SMART | SM00220 | serkin_6 | 484 | 720 | 1.2E-36 | IPR000719 |
| SMART | SM00091 | pas_2 | 115 | 182 | 9.6E-10 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 116 | 225 | 1.2E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 720 | 35.4813 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 113 | 184 | 18.633949 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 603 | 615 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 307 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_012484592.1 | uncharacterized protein LOC105798899 [Gossypium raimondii] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D2RYX1 | Serine/threonine-protein kinase CTR1 OS=Gossypium raimondii OX=29730 GN=B456_006G080100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology