Basic Information
Locus ID:
nbisL1-mrna-5458
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein of unknown function (DUF1221)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002084F_pilon | 5457100 | 5461769 | - | nbisL1-mrna-5458 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.51 | 10,670.38 Da | 53.33 | 90.41 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021887526.1 | - | 0 |
| TrEMBL | A0A7J0F138 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg23533, jg29425 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_1653, gene_24291 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah022888, Ah035297 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g023940 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg21412, Sbi_jg22442, Sbi_jg4001, Sbi_jg49210 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg16321, Seu_jg6033 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00000546, GOSA_00016440 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl10964, Sgl16338, Sgl16366, Sgl62881, Sgl67490 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000015115, gene:ENSEOMG00000018401 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.1AG0001810, CQ.Regalona.r1.1BG0019680 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30005460, pistato.v30134840 |
| Apiaceae | Apium graveolens | 2 | Ag6G00008, Ag6G00114 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G012810, COCNU_14G000130 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103703034, gene-LOC103708349, gene-LOC103713504 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.2728.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT1G01450.1, AT1G64300.1, AT5G41730.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10009834m.g.v1.0, Thhalv10023305m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 3 | Sp1g00870.v2.2, Sp2g00460.v2.2, Sp7g00360.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g024490.2N, BniB02g000470.2N, BniB04g022720.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0201 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G0227, Cgl03G0249 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g12720 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g15970 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG04.749, evm.TU.LG10.1502 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028430 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G01742 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2458, AH02.2373, BH02.2477, CH01.2629, CH02.2661 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_1AG0025050, gene-QOZ80_1BG0075600 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0093020.1, HORVU.MOREX.r3.3HG0273160.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_006271, gene-QYE76_015122, gene-QYE76_053920 |
| Poaceae | Oryza coarctata | 3 | Oco01G014800, Oco09G017970, Oco10G017880 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g43350.1, LOC_Os05g50830.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G198600, gene-BS78_09G252200 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0505783, Pt_Chr0603388, Pt_Chr0603429 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G015060, Chr05G018720, Chr18G016240 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G714800, Tel3E01G383900 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC1AG062560, gene_TRIDC1BG071730 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G424900.1.cds1, TraesCS1B02G459300.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb344930_P001, Zm00001eb358440_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-24727, nbis-gene-50532 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g10675, Zma_g28899 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG05.173, evm.TU.LG10.1002, evm.TU.LG17.1014 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g13980 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_14_RagTag.128, evm.TU.Scaffold_16_RagTag.107 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-18283, nbisL1-mrna-21699 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-19436, nbisL1-mrna-4391, nbisL1-mrna-7533 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-20375, nbisL1-mrna-7382, nbisL1-mrna-8606 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000003l.221, evm.TU.utg000007l.319 ... |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00014287, Maker00018647 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-15984, nbisL1-mrna-1718, nbisL1-mrna-3568 |
| Rhizophoraceae | Rhizophora mangle | 5 | nbisL1-mrna-10970, nbisL1-mrna-19573, nbisL1-mrna-5458 ... |
| Salicaceae | Populus euphratica | 3 | populus_peu27594, populus_peu31587, populus_peu34502 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132608774, gene-LOC132634819, gene-LOC132645482 |
| Solanaceae | Solanum chilense | 3 | SOLCI002865400, SOLCI003907100, SOLCI004792900 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107007931, gene-LOC107028092, gene-LOC107028459 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_13875, gene_744 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G4254, TC02G0613 |
| Zosteraceae | Zostera marina | 2 | Zosma04g06820.v3.1, Zosma06g26040.v3.1 |