Basic Information
Locus ID:
nbisL1-mrna-5430
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 6098243 | 6102190 | - | nbisL1-mrna-5430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 62,911.51 Da | 45.20 | 78.15 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 6 | 261 | 2.20078E-135 | - |
| Pfam | PF00069 | Protein kinase domain | 7 | 260 | 3.4E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 288 | 1.04E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 87 | 273 | 4.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 86 | 2.3E-20 | - |
| SMART | SM00220 | serkin_6 | 7 | 261 | 1.2E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 7 | 261 | 47.594139 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 13 | 36 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 128 | 140 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 373 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021615258.1 | serine/threonine-protein kinase Nek6 isoform X1 [Manihot esculenta] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A251KR69 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G166700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology