Basic Information
Locus ID:
nbisL1-mrna-5378
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 1662157 | 1664307 | + | nbisL1-mrna-5378 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 56,826.39 Da | 38.66 | 89.08 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 34 | 256 | 6.38155E-72 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 35 | 264 | 1.8E-59 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 387 | 500 | 3.4E-22 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 33 | 267 | 4.01E-62 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 499 | 1.83E-37 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 32 | 271 | 1.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 349 | 461 | 7.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 462 | 509 | 2.5E-8 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 386 | 533 | 18.181284 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 392 | 415 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 145 | 151 | - | IPR019825 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 317 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021608773.2 | L-type lectin-domain containing receptor kinase VIII.1 [Manihot esculenta] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W776 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G063500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology