Basic Information
Locus ID:
nbisL1-mrna-5367
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
MPK6
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 4253793 | 4254603 | + | nbisL1-mrna-5367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 16,356.53 Da | 48.86 | 93.26 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 99 | 1.11E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 116 | 1.8E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 126 | 1.8E-42 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43790.1 | MAP kinase 6. Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. | 0 |
| RefSeq | XP_040954112.1 | mitogen-activated protein kinase homolog D5 [Gossypium hirsutum] | 0 |
| Q40532 | Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum OX=4097 GN=NTF4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1R3KT81 | Mitogen-activated protein kinase OS=Corchorus olitorius OX=93759 GN=COLO4_04656 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022965 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G002610 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-4295, nbisL1-mrna-5367 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00037759 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G03560, Lb6G31696, Lb6G32416 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG16.268 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-30280, nbisL1-mrna-30291 |
| Salicaceae | Populus euphratica | 1 | populus_peu31637 |