Basic Information
Locus ID:
nbisL1-mrna-536
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 3135909 | 3139835 | + | nbisL1-mrna-536 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.73 | 59,940.21 Da | 46.23 | 103.64 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 26 | 441 | 4.2E-58 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 143 | 194 | 2.4E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 20 | 443 | 1.4E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 5.7E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 5.7E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 5.7E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 5.7E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_034889726.1 | sodium/hydrogen exchanger 2-like [Populus alba] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2L0W017 | Sodium/hydrogen exchanger OS=Populus nigra OX=3691 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology