Basic Information
Locus ID:
nbisL1-mrna-5336
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 3964690 | 3972284 | + | nbisL1-mrna-5336 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 65,907.58 Da | 42.75 | 69.83 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 120 | 491 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 123 | 427 | 1.8E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 446 | 490 | 1.1E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 479 | 5.93E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 208 | 444 | 4.2E-71 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 112 | 207 | 7.0E-36 | - |
| SMART | SM00220 | serkin_6 | 122 | 427 | 1.4E-105 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 428 | 492 | 3.2E-8 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 428 | 500 | 14.040918 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 427 | 48.399776 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 151 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 570 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 509 | 570 | - | - |
| Coils | Coil | Coil | 85 | 105 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30640.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_039020875.1 | serine/threonine-protein kinase tricornered-like [Hibiscus syriacus] | 0 |
| Q6TGC6 | Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii OX=4754 GN=CBK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D2PRF5 | Serine/threonine-protein kinase tricorner-like OS=Gossypium raimondii OX=29730 GN=B456_005G119300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology