Basic Information
Locus ID:
nbisL1-mrna-5311
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 1289795 | 1304305 | - | nbisL1-mrna-5311 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 242,636.77 Da | 44.99 | 102.53 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 1693 | 2084 | 1.18E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1432 | 1671 | 4.71E-15 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 772 | 1045 | 8.63E-15 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 4 | 370 | 2.72E-15 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1077 | 1292 | 2.69E-7 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 511 | 756 | 2.43E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 854 | 1060 | 6.6E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 659 | 2.4E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 309 | 1.3E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1068 | 1302 | 1.2E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1303 | 1583 | 3.3E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 669 | 849 | 8.9E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1902 | 2100 | 1.1E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1601 | 1828 | 3.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 137 | 3.9E-12 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048236163.1 | uncharacterized protein LOC8288482 [Ricinus communis] | 0 |
| TrEMBL | A0A2P2MRK2 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology