Basic Information
Locus ID:
nbisL1-mrna-5306
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 1251807 | 1264116 | - | nbisL1-mrna-5306 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 283,485.78 Da | 45.59 | 101.07 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 162 | 397 | 1.4E-42 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 470 | 1066 | 1.45E-25 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 889 | 1305 | 5.44E-14 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 156 | 409 | 2.65E-42 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 2107 | 2440 | 1.69E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1713 | 1984 | 1.18E-16 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1447 | 1692 | 1.84E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 661 | 878 | 3.8E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1071 | 1245 | 1.8E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1334 | 1599 | 4.6E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 497 | 658 | 1.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 881 | 1070 | 2.7E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 311 | 399 | 5.9E-15 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1790 | 1993 | 2.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1994 | 2175 | 1.5E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1605 | 1787 | 7.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2234 | 2499 | 1.0E-13 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 310 | 5.9E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 344 | 358 | 2.9E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 252 | 266 | 2.9E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 2.9E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 618 | 634 | 2.9E-16 | - |
| Coils | Coil | Coil | 2230 | 2250 | - | - |
| Coils | Coil | Coil | 437 | 457 | - | - |
| Coils | Coil | Coil | 36 | 95 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27220.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_043808119.1 | uncharacterized protein LOC110608921 isoform X1 [Manihot esculenta] | 0 |
| O81825 | Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1 | 0 | |
| TrEMBL | B9REY6 | Phosphoprotein phosphatase, putative OS=Ricinus communis OX=3988 GN=RCOM_1429720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology